rs108774403 SNP Detail

Summary

• ID
  rs108774403
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13374240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ATTGGGAATT CTTTTTCCCC AAAAAGTTTA TTCTTGAAAG
  GTAGATTATA GGCACCTTCC AGAGGTTGGT TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT
  Y
  TTTCTTTCTT TTTTTCGGGA AAGGGTTTCT CTGTGTAGCC CTGGCTGTCC TGGAACTCAC
  TCTGTAGACC AGGCTGGCCT CGAACTCAGA AATCTGCCTG C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148684107	ENSMUSSNP3106111	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108774403					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13374240 () rs orientation: forward

Symbol	Name	Function Class
Rr180371	regulatory region 180371	1561 bp proximal
Tmco3	transmembrane and coiled-coil domains 3	1316 bp downstream