rs108775198 SNP Detail

Summary

• ID
  rs108775198
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:86489522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGCCGGT ACATAGCAGG
  GGATTCTGTT TTGGGAATGG TTATACACTA GGGACTTGCC TTTCTGACCA ACCATTTATT
  ATAAAACATC CGAATTGGGA CTCAGAAATG TTCAGCCAAT CAGTTCCCTT GTAAAGAAAT
  CAAAGATCTG CTTCTATCTT AGTGACAGTC TGTCTCCAAA CAAAGGCTTT TCTATACCTC
  M
  TTCAGTTGGC TTAAACCAAG TTGACGACTG TTTCAGTGTT TTCTCTCACA CAAACGCCAC
  CTAAGAGATT TCTGAGGGGA AAAAAGAATT CATTTAAGGA AGGAAAAAGG AAGGCATGAA
  AGAAGAAAGA GAGTAACTCA AGGAAAAAAG GAAGGAGGAA GGAAGGAAGG AAGGAAGGAA
  GGAAGGAAGG AAGAAGGTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146863006	ENSMUSSNP5779136	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108775198					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86489522 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Or8k38	olfactory receptor family 8 subfamily K member 38			Intron
				mRNA-UTR