rs108776937 SNP Detail

Summary

• ID
  rs108776937
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:88277001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTATTATA AAAATGTTTT
  TGTTTTAGTC CCAGGAGTGG GATATTGGGC TGCTATACAG CAGCTGACTA TGATGTGCCT
  CGTGCTCTAG CAGAGGCTTG GTTTTGCCAG CTGCTGATAG TTTCTGCGAT TGCGTGGCAT
  TTGGAATTCT GGGAAATTTT CCAGAGAGTA TATAAAGTCC TGATAGGTGG GTTGTTGGTT
  Y
  GTTGGTCCAA GGAACTCAAT ACCCTTAATC ATCAGGAAGT AATCTAGTGA TATACATTCC
  AACCCTGAAT CAAAATTAGG GTTTTTCTGG GGTCTCCTTT CCTCTCTATC CTTTTTTCTC
  TTTCATCTAG TGTTATGGGG CTGAAAGGGT GGAATGAAAG GAGGTGAGAA GCCAATTTTG
  AATTATCCAC TGTTAAGGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325500512	CHEV_17_88368913	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108776937					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:88277001 () rs orientation: forward

Symbol	Name	Function Class
Gm50041	predicted gene, 50041	353 bp upstream
Rr333904	regulatory region 333904	601 bp distal
Rr343663	regulatory region 343663	2 bp distal