rs108782998 SNP Detail

Summary

• ID
  rs108782998
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154522059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCCGTTCC TTCCTTGGTT
  CCTCTACTTT CTGACCGCTG TGAACTAAGT AGCTCTGTTG TGCCCTTGTG CTCAGATGCT
  CCGCCTCATC GCAGGCTCCA AAGCAGTGAG GCTAACTGAC CATGGGACTG ATGCTTTTGA
  AACTGTGAGC CAAAATAAAT CCTTCCTCTT TTAAGTTGAT TTTGCCAGGT ATTATGTACC
  R
  CCAACATACA GCCGGATTTG AATCTACTAT TTTGAGGTAT AGATGATTTT TTTTTTTGGC
  CACTTGCTCC TAAGTTCCAG GGGTATGGCT GTTAGGAATC TTCTCTAAGA AGAGCCCGGG
  CCTCCATCTC CCCTCTCCTT ACACCTCTGC ATCCTCCTCC ATGGCCTGTA GCAATGTGCA
  TGTTCTTGGT AACCGTGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148102371	ENSMUSSNP4190681	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108782998					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154522059 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15440	CpG island 15440	793 bp proximal
Prdm16	PR domain containing 16	within coordinates