rs108783335 SNP Detail

Summary

• ID
  rs108783335
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135874663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAA AAAAAAAAAA AAAAGAAAAA
  S
  AAAACAAATC TTAGTTCTGC ATGAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147559901	ENSMUSSNP2244680	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108783335					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135874663 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15099	CpG island 15099	181 bp proximal
Gm68296	predicted gene, 68296	within coordinates
Id3	inhibitor of DNA binding 3	1960 bp downstream
Rr377254	regulatory region 377254	within coordinates
Rr602286	regulatory region 602286	1819 bp distal
Rr602287	regulatory region 602287	155 bp distal
Rr602288	regulatory region 602288	within coordinates
Tssr39669	transcription start site region 39669	104 bp downstream