rs108784203 SNP Detail

Summary

• ID
  rs108784203
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128549689 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CCTCATGTGG GGAAGGCATT ATTTCAAGGG GTGGGGCTGA
  GGGTACTACT TCCTCAGGTG GGGCAAACCC TTGAGAATCT GAAGATTCAA AATTCTCAGC
  K
  TCAACATGGT CTTCCCACAC ATCCCCGTCC CATGTTGTAG GATCCCATTC TTTGCCAATT
  AGAGCCCTTA CTTTAACTGT CGACACACTC TGAGGATGAG A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148482474	ENSMUSSNP2534820	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108784203					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128549689 () rs orientation: forward

Symbol	Name	Function Class
D2Mit305	DNA segment, Chr 2, Massachusetts Institute of Technology 305	1339 bp proximal
D2Mit305.1	DNA segment, Chr 2, Massachusetts Institute of Technology 305.1	1252 bp proximal
Mertk	MER proto-oncogene tyrosine kinase	within coordinates
Rr58325	regulatory region 58325	289 bp distal
Rr58326	regulatory region 58326	713 bp proximal
Tssr20064	transcription start site region 20064	947 bp upstream
Tssr20065	transcription start site region 20065	987 bp upstream
Tssr20066	transcription start site region 20066	1286 bp upstream
Tssr20067	transcription start site region 20067	1322 bp upstream