rs108793873 SNP Detail

Summary

• ID
  rs108793873
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46855393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTTTGTT TCTTTTTTTA
  CCTCGGGCTA CTAACAAACC ACAACCAACC TTCTTAATGG CCAACAACCA CTCCACACGC
  CTTTCAGGAG CCTAGCACTC ATGCACTCCG CACACAGTCA CAGAAATTGT CTGAAGCTGG
  CAGAGCCAGG CTTCTACTAG AGCACGGAGT CAAGTCACAG TCAGCAGCTG CAGACAGTCC
  G
  AAGCAGCCCC GCAGCCCACA CCTGGGGCTA CAACAAAAGC CCATTCTCAT AATATAGTTC
  TGGTTTTTAA AAGAAACCCA AATGCCAGAA TTCTCAGAAA TGTCACTGCA GGGGAGGTGG
  GCACTAAAGA GATGAGCAGG GGTGAAGAGC ATTTGCCGCT CTACAAAATA ACCAAGGGTC
  AGTGCCTAGC ACCCACATGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145700323	ENSMUSSNP6256720	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108793873					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46855393 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9232	CpG island 9232	1490 bp proximal
Cul9	cullin 9	within coordinates
Rr527757	regulatory region 527757	1248 bp proximal
Rr527758	regulatory region 527758	1911 bp proximal
Tssr148330	transcription start site region 148330	1808 bp downstream