rs108796377 SNP Detail

Summary

• ID
  rs108796377
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6882327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TGGTCTAGTG TGGTCATCCT TTTGGATTCA GGCTGTGCAG
  TGACTCAGCC CTGCTGTGTG TCAGTCTCCT ACCTCAGAAG GAGGACGGAT GAAACTCACC
  T
  TTCCCAGGGC CAACAGGAAG CCAAGAAGGA GGGCAGAGAA TGGTCTAGTG TGGTCATCCT
  TTTGGATTCA GGCTGTGCAG TGACTCAGCC CTGCTGTGTG T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145092773	ENSMUSSNP5276113	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108796377					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6882327 () rs orientation: forward

Symbol	Name	Function Class
Rr521399	regulatory region 521399	932 bp proximal
Tmem181c-ps	transmembrane protein 181C, pseudogene	within coordinates