TTGGTGAGAA AGCCCTGCAC ACTATCTGCT AGTTCTGTGG CCTACCCAAG GCCTTTAGCT AGTATATGCA GCTGCTACCT ACTACCCCGG ACCCCGGGAC R CATGCTAACA ATGAATCCCG GGCCAGCCAA GTGGCCTTAG GGGTGGTAAA CACACTTGCC CCACAGCTTA CAGCTGGAGT CACATCCATG TGGTGGAAG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss137771108 | ENSMUSSNP3959478 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | A |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
||||
rs108805489 | SNP | G | A | A |
Location: Chr12:54791653 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr260899 | regulatory region 260899 | 53 bp distal | ||||||
Rr260900 | regulatory region 260900 | 1548 bp proximal | ||||||
Rr263772 | regulatory region 263772 | 629 bp distal | ||||||
Snx6 | sorting nexin 6 | 1471 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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