rs108809223 SNP Detail

Summary

• ID
  rs108809223
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115060875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTCCTTG CCTGGTGGCT
  GAACGGTGGC ATTCCTCCTG TGGCATCTGT CCTCGGACAC ACTGTGATGG ACACCTGCCA
  AAAAGCCTTC ACTGGGTAGG CAGGCTTCCA CATCATTGGT CTGTGTGCCT CCTCCCTTCA
  CCCCCAAGGT GACTCTGAGT CTTCATCCAG CCAACCTCTC TCTTTTAGCC CCTCTGTCCT
  R
  AAATTCTCTT TTGCCAAGTC ATCTAGATAG AAGAAGCTGT CAAGACCCCT TTTATGTTGG
  TCATTTCTGG GACTCCCTTT TAAAAGCAAA TGCATATTTT TTTCTTGGTT AAGGCAGGGA
  GAAATGTATC CTCAGATATG TTCAAGAAAG GGTAGGGAAG ACCATCAGCT AGGCCTGCTG
  TGCAGTGCTG GGATTGGGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137004592	ENSMUSSNP5940290	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108809223					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115060875 () rs orientation: forward

Symbol	Name	Function Class
2210411A11Rik	RIKEN cDNA 2210411A11 gene	1069 bp upstream
Osbpl10	oxysterol binding protein-like 10	within coordinates