rs108815459 SNP Detail

Summary

• ID
  rs108815459
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45177072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACC TCAGGTTTAC AGCTCTACCC
  Y
  GCATGAGAAC ATCTTAGAGA ATGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136408231	ENSMUSSNP6856225	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss322942739	CHEV_9_45073857	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108815459					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45177072 () rs orientation: forward

Symbol	Name	Function Class
Il10ra	interleukin 10 receptor, alpha	within coordinates
Mir7086	microRNA 7086	869 bp downstream
Tssr84758	transcription start site region 84758	879 bp downstream
Tssr89257	transcription start site region 89257	1584 bp upstream
Tssr89258	transcription start site region 89258	1540 bp upstream
Tssr89259	transcription start site region 89259	1523 bp upstream