rs108827469 SNP Detail

Summary

• ID
  rs108827469
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183833693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGTGGCT CCATTCAACA
  AATAGTCTGA GAGATCCCAG CTTGGCGTTA ACTCGGTTGC ATCTGGCTAA GCAGCATATG
  ATCTGCAGCC AGCTCTCTTG GGAAACTGTC TTGATGTCCC AGGACACCGA GGTTTCCTTG
  ATTTTATCAG GGGTGCACCT GCAAGATGCC AGCCCTGCAA AGGTCATTTA AGAAGTACTT
  R
  CAAGTAGCTA CTCCTCACAC TGGGGCTACA CATGCAAAGT TAAGAGTTAA TTTTGAAGAC
  ATGAAGGGGA TCTCCACCGA GGCTGTGGTT AGGGACCCTT CCTTTCTCTC TCTCTTTCCA
  CCCCTTTTGC CTACCCCGTA TTAAGATTTC TATCTTTGGG CTTCTTTTGA AGCCCAGGTA
  TAAGTACAGA TGTTTTAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146417508	ENSMUSSNP578426	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108827469					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183833693 () rs orientation: forward

Symbol	Name	Function Class
Rr425178	regulatory region 425178	within coordinates