rs108836093 SNP Detail

Summary

• ID
  rs108836093
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:20360286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATGTCTC TAATGATAAT
  ATCAGCATCT TCTTTTCTCG ATGCATTAAA ATATGTAAAT GAGGGCTGGG GTAGTAACTC
  TGTGTTCGAG CACTTGCCTA TAGGTTCAAG GCCTTGGATT CAATCCTCAG TACCACACAC
  AAAAGAGTGG GTAGTGTTTT CTTGATTCCT GTTCAACATG TAAACCTTAA ATTATGTTCA
  C
  GTTTGTGTGT GTCTCTGTTT GTATGTGTAT CCCTTTGTGT TTGTCTCTAT GTGTGTGTGT
  GTCTCTGTAT GTGTGTGTCT GTGTCTGTGT GTGTGTCTCT CTATGTCTGT GTGTGTACCT
  GTGTTTGTAT GTGTGTGTAT ATGTCTATGT GTATGTCCGT GTGTGTGTCT GTGTGTGTGT
  CTGTGTGTGT GTCTGTGTGT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss137276221	ENSMUSSNP7208046	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108836093					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:20360286 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4468	CpG island 4468	1787 bp proximal
Gm49692	predicted gene, 49692	1207 bp downstream
Gm61293	predicted gene, 61293	1932 bp upstream
Rr463625	regulatory region 463625	1795 bp proximal
Tssr112921	transcription start site region 112921	1930 bp upstream