rs108836685 SNP Detail

Summary

• ID
  rs108836685
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76724909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTTCA ATTAAAAAAG
  GGCAAGGTAA ATAAGGGCAA GCTGTTTAAC AGCCATAGTG AATGGACCCA CAGAATAAAG
  TCATAATATC TTCTATTTTC AACTGGAAAT TCACCTTTGT ATCCATTATA GACAAGGTGT
  ATAGAAGAGG GGCTGTAGAC TGGAGAGATG GCTCAGTGGT TAAGAGCACC ATCTGCTCTT
  Y
  CAGAGGTCCT AAGTTCAAAT CCCAGCAACC ACATGGTGGC TCACAACCAT CTGTAACAGA
  ATTAAGATGC CCTCTTTTGG TGTGTCTGGA GACAGCAACA GTATACTCAC ATACATAAAA
  TAAATAAATC AGAAGAGGAG GAGGAGGAGG AGGAGGAGAG GGGCTGTGTT CACCTCACGT
  GTACGGAGAA ACTTCCGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137907714	ENSMUSSNP4860527	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108836685					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76724909 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4784	CpG island 4784	1462 bp distal
Gm60317	predicted gene, 60317	1505 bp downstream
Rr468229	regulatory region 468229	1437 bp distal
Rr468230	regulatory region 468230	783 bp distal
Sptb	spectrin beta, erythrocytic	Intron
Tssr113983	transcription start site region 113983	1834 bp downstream