rs108836688 SNP Detail

Summary

• ID
  rs108836688
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26757882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCCTCGG GGCTGGAAAG
  AAGGCTCAGC AATTAAGAGC TCCTGCTGCT CTTACAGAGG ACCCAGGTTT GGTTCCCAGC
  ACTCAGCCTG AGCAGCTCGC ACCACCTGTG ACTCCAGCCC CAGGGAATCC CACTCCTTCC
  CCCACTTCCC ACAGGCACCT CCTTCCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  C
  ACACACACAC ACACAATTTC TAAATAAATA AATCTTTTTA AAAAATACTA TTTACAAACT
  CAATCACTGA TATAAAATAC CCCAACATAA GTTGTGACCA TCTTTTCAGG AAAATTATAA
  AATTATAATT ATAAAATTAG GTGATATTAA AGAAGATCTG GGTATAACAT ATAGAGGTGA
  ATGCATGTTC ATTGTCAAAA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145405463	ENSMUSSNP4226714	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs108836688					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26757882 () rs orientation: forward

Symbol	Name	Function Class
Gm50275	predicted gene, 50275	668 bp upstream
Rr405114	regulatory region 405114	558 bp downstream
Tssr143246	transcription start site region 143246	556 bp downstream