rs108841974 SNP Detail

Summary

• ID
  rs108841974
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:90621048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAGGTGTA TATTTTCATT
  CATTCTTCTT GCACCCTGGG CTCCTCTGCT GTCTTCCCCT GTGATGGTTT GTATATGCTT
  GGCCCCCAGG GAGTGATACT ATTAGGAGGT GTGGCCTTGT TGAGTAGATG TATACCACTA
  CACCTGGATT TGGAACTTGC TTTGTTCAAG GCTGACCTTG AATTCAGTGA TCTGCTTGCC
  K
  CAGTCTTCTA GGATAAAAGG CATGTATTAC CTTCCCTGGG CGTAAGTTTT TCATAGCCAC
  TATGCCTCAA GATCTCTGTG TCAAAATCTG GGTCAGAAGC CTGTGTCTTC CAGCTTTAAG
  ATCTGTATCA CAGGTGTGCC CTTCATTTCT GGATTTTAGT TCATTACAGA TGTAGTCAAG
  TTGACAACTA GGAATAGCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss134244305	ENSMUSSNP4813551	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108841974					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:90621048 () rs orientation: forward

Symbol	Name	Function Class
1700084M14Rik	RIKEN cDNA 1700084M14 gene	1531 bp upstream