rs108845431 SNP Detail

Summary

• ID
  rs108845431
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:81008010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTGCGCAC ACACGGTGCA
  TAGATACACA TGCAGCCAAA ACATTCATAC AACATAAAAT AAACTGAAAG CAAAATATAT
  CCATCACATG ACCCAAACAT GCCATTCTTG GTATTTTGTG AAAGGACTCC AAGTCAACAC
  ATCAGGAACT CATTAGGTGT CTAACAACAG AGGAACGGGT AAAGAATTGT TTATAAAAGA
  A
  TGTGTGTGTG TGTGTGTAGA AAACAAAAAT GAGGTCGAAG TATCTAGCAG AACAAAAGGA
  ATAATTGAGA GGGGTGAGAA AAGGGAGGGA GAGGAAGGGA TATGCCTAAG GTACTATATC
  TGTATGAAAA TTTTAAGAAA TCAAAAAGAA AGAAGAGGTG AGTGGAGAAA TGAAGGGTAA
  TTATACAGGA CAAAAGAAAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146075171	ENSMUSSNP5268261	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108845431					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:81008010 () rs orientation: forward

Symbol	Name	Function Class
Gm66613	predicted gene, 66613	within coordinates
Map4k3	mitogen-activated protein kinase kinase kinase kinase 3	within coordinates
Rr343206	regulatory region 343206	1191 bp proximal
Tssr149503	transcription start site region 149503	170 bp downstream
Tssr149504	transcription start site region 149504	1426 bp downstream