rs108849937 SNP Detail

Summary

• ID
  rs108849937
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:80038925 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TCTCTCACCC AGAGGCTGCT AGGCCCATAT GTGTCCAGCC
  CCGAGGTATC TTTGCACACT CACACGCACT CTGTGCTCAT GTGTGTCGTG GGAGTTGAGG
  Y
  GTGCCTACAA ACTCCTTGGG CACTGCCCTC TCTCCTCTCT GAGCCACTCT ACCAACATTG
  GACTGTCACG GCAGCTTCTT TAACAGAAGC AGTTCGGTGT G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148214213	ENSMUSSNP6543566	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108849937					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:80038925 () rs orientation: forward

Symbol	Name	Function Class
Rr308002	regulatory region 308002	1325 bp distal
Rr308003	regulatory region 308003	1876 bp proximal
Rr310675	regulatory region 310675	1493 bp proximal
Rr314587	regulatory region 314587	525 bp distal
Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	within coordinates