rs108855678 SNP Detail

Summary

• ID
  rs108855678
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:125220723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTGTGAGA CATTATAGTG
  AGGTTCGGGC AATGAGTTTA AAGGTATTCT GTGATTTAAA ATAGTTCCTA CAATGATAGC
  TACACTTAAA ATCAGGTGAG AATTTAGATC TCATTTTGAA TTTTCGAACA AAAAATAAAT
  TCTGAAGGAA AATACATGAA TGTTTTTTGT TTGTTTGTTT TTTGAGACAG GGTTTCTCTG
  T
  ATAGCCCTGG CTGTCTTGGA ACTCACTTTG TAGACCAGGC TGGCCTTGAA CTCAGAAATC
  CACCTGCCTC TGCCTCCCGA GTGCTGGGAT TAAAGGTGTG CACCACTATT CCCGGCCAGG
  AAAATACATC AATATTAATA CAATCTCAGC CCTCTGGACC CCAGACATAT GGAGGTACAA
  ATGGGACCTT AATGACAAAT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135808292	ENSMUSSNP2218404	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs108855678					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125220723 () rs orientation: forward

Symbol	Name	Function Class
Ndst4	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	Intron
Rr584610	regulatory region 584610	876 bp distal