rs108855704 SNP Detail

Summary

• ID
  rs108855704
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:22533806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CCAGCCCCGC AGCTCCTCTA ACCTGGGACC TTTCGGGGCC
  GCCGGGCTGC TGTGCCGACA GTTGCGCTGC CGACTGCCGC CTCTCCCAGG CCCTCTGCCA
  C
  GGAAATGCTT CTGAGGAGAC TTTTCCGGGT CCAGAAACAG CTAGGACGCA GAAACCGAAA
  GGTAGAAAGT TGATTGGTGG AAGTCCCTGT CATTCCGGCC T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145304127	ENSMUSSNP3118784	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs108855704					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:22533806 () rs orientation: forward

Symbol	Name	Function Class
Gm7072	predicted gene 7072	mRNA-UTR
Gm53992	predicted gene, 53992	97 bp upstream
Rr523017	regulatory region 523017	within coordinates
Rr523018	regulatory region 523018	2 bp proximal
Tssr146602	transcription start site region 146602	16 bp upstream
Tssr146603	transcription start site region 146603	within coordinates