rs108866702 SNP Detail

Summary

• ID
  rs108866702
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127482924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTGGGTT AAAAGCATTT
  GTTGCTCTCA CAGATTTCAG GTCCCAGACC TTTGGGTGGC TTATAGTCTT CTGTAACTCC
  AGTTCCACGG GCATATGATA TCCAATTCTG GCCTCCATGG GCACCTGCAC TCATACACAT
  AGATTAAAAA GAAAAAAAGA AAAAACAAAA AAGCCCTCCA AATGTCATTG TCTCCTCCAG
  A
  TTTACCTGAT CACACAGATT GGTTGTGTCA GTTGTGCTTC TAAAGATTGC AGCATTATTT
  TCCATTCACA CCCCTGTTCC CCCAGTAACC AGTAGACCAC AGAGTTCATT TCTTCTCTTC
  CTGACCATAA TCTGGCCTTG TGATCTGTTT TAGCAGTGAC ACATGGTTTA ATAGACACTG
  TGCATCTTAC CTAGTTGGCA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135869024	ENSMUSSNP2426754	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs108866702					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127482924 () rs orientation: forward

Symbol	Name	Function Class
Alpk1	alpha-kinase 1	within coordinates
Tssr35586	transcription start site region 35586	723 bp upstream
Tssr35587	transcription start site region 35587	1473 bp downstream