rs108867320 SNP Detail

Summary

• ID
  rs108867320
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:37227773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T AATTCTCCTT AATAGGGACG GGGTTTCGTT TTCTCTCTCT
  CTTGCTTCTT ACACTCTTGC TCCTGAAGAT GTAAGCAATA AAGTTTTGCC GCAGAAGATT
  T
  TGGTTTGCTG TGTTCTTCCT GGCCGGGCGT GAGAACGCGT CTAATAACAA ATGCTTCTCT
  CTTTCTTTCA ATAACCCCTA TATTCAGAAG TTGACTACTA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148880341	ENSMUSSNP1477686	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108867320					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:37227773 () rs orientation: forward

Symbol	Name	Function Class
F13a1	coagulation factor XIII, A1 subunit	within coordinates
Rr271551	regulatory region 271551	1228 bp proximal
Rr279043	regulatory region 279043	1324 bp proximal
Rr283270	regulatory region 283270	1828 bp proximal