rs108893995 SNP Detail

Summary

• ID
  rs108893995
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:54792075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCTGGCCT CCAGCAACTG CACTTGGAGC AGACAGACAG
  ATGGGCAGGC AAAAGAGCTC ATACAGAGTA AATAAAAAAT AAGCAAAAAA TGTAATAAAA
  W
  TTTTCAGAAT ACTCACTCCT TTCTGCTCCT AAAGCGACCA CCTTTTTAAA AACAAAATAA
  CCTACGGGTA AGAGAACTGC TGTATCCTTT GTCCCTCTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss137771126	ENSMUSSNP4943664	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108893995					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:54792075 () rs orientation: forward

Symbol	Name	Function Class
Rr260899	regulatory region 260899	475 bp distal
Rr260900	regulatory region 260900	1126 bp proximal
Rr263772	regulatory region 263772	1051 bp distal
Snx6	sorting nexin 6	1049 bp downstream