rs108895106 SNP Detail

Summary

• ID
  rs108895106
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:93934741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTTTTAAA AAGGGTTTTT
  TATGGTTTTT AGAAGAGTGT TTTAGTGGTA TTTTGTGGTA TTCAGGGCTT AGTGTATATT
  TAGTGTTTTT TCCGGTTTTA TAAAGGATTT TAGTGTATGT TAGGTTTGGG GGCTAAATTT
  TTTAGGCTTT ATGGTTTCTT CTAGGGTTTA ACTTTTTTTG GGTTTTTTTT TAGTGTTCTT
  A
  AGTTGTTTTT TTTTTTTTTA TAATTTTAGT GTTTTATTTT TGAGGTTTAA GAGTTTTAGG
  GTTGTCAGGC AGTGGTGGCA CAGGCCTTTA ATCCTAGTAC TTGGGAGGCA GAGGCAGGTG
  AATTCCTGAG TTGGGGGCTA GCCTGGTTTA CAGAGTGAGT CCCAGGACAG TCTGGAATAT
  ACACAGAGTG AGTCCCAGGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss134248249	ENSMUSSNP6023647	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108895106					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:93934741 () rs orientation: forward

Symbol	Name	Function Class
Rr8004	regulatory region 8004	1177 bp distal
Rr8005	regulatory region 8005	505 bp distal
Rr406123	regulatory region 406123	240 bp upstream
Rr406124	regulatory region 406124	1197 bp upstream
Rr406125	regulatory region 406125	1956 bp upstream