rs108896613 SNP Detail

Summary

• ID
  rs108896613
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68001088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CACAAACTCA CAGTCAGTTC TGTGAGCTTT GAACCAGTTC
  CAGAACCAGG GCTACAGCAA GTGGCAGTTT GGCCTTTTCG CTTCTCTGAA AAAAAAAAAA
  T
  TTTTTTTAAC ACCTTAAAAA ATTCCCCATA ACTGCTCCCT TCACACCTTT TATCTCCTTC
  CTAAATCCAA AATATTCACT CACTAAATCT CCAAGGTTGC T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147147253	ENSMUSSNP7127763	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108896613					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68001088 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Gm66190	predicted gene, 66190	within coordinates
Gm66212	predicted gene, 66212	within coordinates
Rr401964	regulatory region 401964	91 bp upstream
Rr433213	regulatory region 433213	within coordinates
Rr433214	regulatory region 433214	161 bp proximal