rs108896624 SNP Detail

Summary

• ID
  rs108896624
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26758494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATAC ACACATATGC ACACATACAT
  Y
  CATACACACG CACATACAAA CATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325342293	CHEV_17_26676465	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108896624					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26758494 () rs orientation: forward

Symbol	Name	Function Class
1700049J03Rik	RIKEN cDNA 1700049J03 gene	1867 bp downstream
Gm50275	predicted gene, 50275	1280 bp upstream
Rr405114	regulatory region 405114	1170 bp downstream
Tssr143246	transcription start site region 143246	1168 bp downstream