rs108901066 SNP Detail

Summary

• ID
  rs108901066
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:177992510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATTCAAATGA AAACTAGTAC TATTATACAC CCGTGGCTCT
  TGAGGAGTTT GTCGTGCACA AGGCGCATCC AAAAAACATT CCGTTGCAAA AAATAAAGGC
  W
  AGGTAGAAGA ATTGGAATGT ACCGGTAAAG GTACTGGCCA TGATCTTACT ATGGCCCACA
  AAGGTATACT TATCCCGGTC TCAATCATCA GGAGCAGGAG A                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145786761	ENSMUSSNP5353383	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108901066					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:177992510 () rs orientation: forward

Symbol	Name	Function Class
Catspere2	cation channel sperm associated auxiliary subunit epsilon 2	within coordinates
Gm69636	predicted gene, 69636	within coordinates