rs108915756 SNP Detail

Summary

• ID
  rs108915756
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81358593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG AAAGTGGACT CTGCTACTCT
  Y
  CTCCTCTCCT TCAACCCAAG GCTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	MSM/Ms
ss145163573	ENSMUSSNP1220400	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	MSM/Ms
rs108915756					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81358593 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19358	CpG island 19358	1077 bp distal
Gm32579	predicted gene, 32579	within coordinates
Homer2	homer scaffolding protein 2	1920 bp upstream
Rr650186	regulatory region 650186	1411 bp distal
Tssr73349	transcription start site region 73349	1976 bp upstream
Tssr73350	transcription start site region 73350	1944 bp upstream
Tssr73351	transcription start site region 73351	1881 bp upstream
Tssr73352	transcription start site region 73352	1747 bp upstream