rs108920812 SNP Detail

Summary

• ID
  rs108920812
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:116152228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATA TTTTCACAAT GGAGTACTAC
  W
  TAGCTATTAA AAACAATGAA TTTAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133575171	ENSMUSSNP5152468	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108920812					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116152228 () rs orientation: forward

Symbol	Name	Function Class
Gm8203	predicted pseudogene 8203	1144 bp downstream
Gm66805	predicted gene, 66805	within coordinates
Rr145596	regulatory region 145596	1027 bp distal
Tmcc1	transmembrane and coiled coil domains 1	within coordinates
Tssr58352	transcription start site region 58352	1632 bp downstream
Tssr58353	transcription start site region 58353	1463 bp downstream