rs108935644 SNP Detail

Summary

• ID
  rs108935644
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95181451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGGCTGGC AGGATGGCTC
  AGTGGGCAAA GGCTGCCAGT CTTGACACCC TAGTTCAGTT CCTAAGACCA ACACAGTGGG
  AAGAGTTGGG AATCTTGCCA AGCTGTTCTC TGACCTTTAC AGATGTGCTT GCTGCTGCAA
  GCTCCCACCC CCCACCCCCC ACAAAATGTA TAAATAAATG TTAAGAGTTT TTATTTTATG
  R
  GCTAGAGAGA TGGCTCAGGC ATTGTTCTCC AGCTCCAGGG GACCCTACGC CATCTTCTTG
  CTTCTGGGGG GCATCTCTAC TCACATGCAT ATTCCCACAG ATAGATACAC ACGTATACAT
  ATAATTAAAA AATGTTTTTT GAGACAGGGT TTCTCTGTAT AGCCCTGACT GTCCTGTGCC
  ATTACATTCA GCTAAAACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135510413	ENSMUSSNP5536196	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108935644					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95181451 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580881	regulatory region 580881	383 bp distal
Rr580882	regulatory region 580882	44 bp proximal
Rr580883	regulatory region 580883	503 bp proximal