rs13460109 SNP Detail

Summary

• ID
  rs13460109
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118269593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCCT GTTTTCAGCC ATGAGGTCGT
  Y
  CCTGACCACT TGAGAACCAA GCCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45658444	mCV22652625	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147307524	ENSMUSSNP6876811	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321283079	CHEV_4_118085001	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs13460109					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118269593 () rs orientation: forward

Symbol	Name	Function Class
Med8	mediator complex subunit 8	within coordinates
Tssr38655	transcription start site region 38655	1514 bp downstream
Tssr38656	transcription start site region 38656	638 bp downstream