rs13460210 SNP Detail

Summary

• ID
  rs13460210
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:79975642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGGC AAAGCCGGGG GCGCCTTCGA
  Y
  CCCTACACCC TGGTGAGGCA GCCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325030241	CHEV_15_79921871	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs13460210					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79975642 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7362	CpG island 7362	within coordinates
Gm31134	predicted gene, 31134	within coordinates
Rr312104	regulatory region 312104	within coordinates
Syngr1	synaptogyrin 1	within coordinates
Tssr132156	transcription start site region 132156	234 bp downstream
Tssr132157	transcription start site region 132157	51 bp downstream
Tssr135418	transcription start site region 135418	381 bp downstream