rs13460819 SNP Detail

Summary

• ID
  rs13460819
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:97097327 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CCTTC TGTGTGATCC CCAACCCCCC
  M
  AAAAGTAATG AAAAGCTTTA AAAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38817151	mCV23218366	ABI	CRAMUS_MOUSE	r	SNP	T	G	T	T
ss132693995	ENSMUSSNP1194809	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	G		T
ss323825108	CHEV_11_97067815	CHEVERUD	SCREENING_POP	r	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs13460819					SNP	A	C	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:97097327 () rs orientation: reverse

Symbol	Name	Function Class
Npepps	aminopeptidase puromycin sensitive	within coordinates
Tssr110404	transcription start site region 110404	500 bp downstream