rs13461047 SNP Detail

Summary

• ID
  rs13461047
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5901967 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

             TGCAGTGCAA TTCGGAGTTG CCACGCCCCA GGCTTTATCA GCTCAGAGCA
  S
  AGGAGACAAG GCAAAATCTA ACCCTTAAAC CCAGATCACA GGAAAACAAA           
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss50577048	NES13648069	PERLEGEN	MM_PANEL2	r	SNP	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs13461047					SNP	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50577048	NES13648069	PERLEGEN	MM_PANEL	r	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5901967 () rs orientation: reverse

Symbol	Name	Function Class
Frmd8	FERM domain containing 8	within coordinates
Frmd8os	FERM domain containing 8, opposite strand	567 bp downstream
Rr370436	regulatory region 370436	878 bp downstream
Tssr157784	transcription start site region 157784	1978 bp upstream
Tssr157785	transcription start site region 157785	1925 bp upstream