rs13462283 SNP Detail

Summary

• ID
  rs13462283
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83600740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCAG TTTTGGAACT TGTGATGAAC
  R
  ATGCACAGGA GATGGATCGT GCTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss37141026	NES08459485	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A		G	A	G	A		G	G	G	G		G
ss38711454	mCV23453966	ABI	CRAMUS_MOUSE	f	SNP		A					G		A
ss132473471	ENSMUSSNP1747029	ENSEMBL	ENSEMBL_Sanger	f	SNP		A							A
ss323768121	CHEV_11_83523416	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs13462283					SNP	A	A	A	G	A	A	G	G	A	G	A	A	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37141026	NES08459485	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83600740 () rs orientation: forward

Symbol	Name	Function Class
Tssr103748	transcription start site region 103748	818 bp downstream
Tssr103749	transcription start site region 103749	798 bp downstream
Tssr103750	transcription start site region 103750	1310 bp upstream
Tssr103751	transcription start site region 103751	1322 bp upstream
Wfdc18	WAP four-disulfide core domain 18	within coordinates