rs13462795 SNP Detail

Summary

• ID
  rs13462795
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21575638 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AAAAT GAAGGTTCTG GCCATAGAAG
  R
  CGCTGCGGAC GGAAGGAAGA CAGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss44958365	mCV24451891	ABI	CRAMUS_MOUSE	r	SNP		C	T					T		T
ss50694207	NES13603161	PERLEGEN	MM_PANEL2	r	SNP	C		T	T	T	C	T		C	T	T	C		C	C	C	C		C
ss146182929	ENSMUSSNP2030345	ENSEMBL	ENSEMBL_Sanger	r	SNP		C	T							T
ss325752844	CHEV_19_21672764	CHEVERUD	SCREENING_POP	r	SNP													C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs13462795					SNP	G	G	A	A	A	G	A	A	G	A	A	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50694207	NES13603161	PERLEGEN	MM_PANEL	r	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21575638 () rs orientation: reverse

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	within coordinates
Gm59243	predicted gene, 59243	within coordinates
Rr356955	regulatory region 356955	763 bp proximal
Rr364167	regulatory region 364167	within coordinates