rs13463698 SNP Detail

Summary

• ID
  rs13463698
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:25404129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGTC CTTTCGTTGT TGAATTTGAC
  R
  ATTTCTGAAC TGGTTCTGCG CATGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss39515826	mCV22798293	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145380220	ENSMUSSNP4739195	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs13463698					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25404129 () rs orientation: forward

Symbol	Name	Function Class
4930568E02Rik	RIKEN cDNA 4930568E02 gene	586 bp upstream
Cpgi8755	CpG island 8755	within coordinates
Rr370183	regulatory region 370183	574 bp downstream
Rr523507	regulatory region 523507	1631 bp distal
Rr523508	regulatory region 523508	1727 bp distal
Rr523509	regulatory region 523509	96 bp distal
Tssr5037	transcription start site region 5037	592 bp downstream
Tssr143142	transcription start site region 143142	553 bp downstream
Tssr143143	transcription start site region 143143	537 bp downstream
Tssr146818	transcription start site region 146818	753 bp upstream
Tssr146819	transcription start site region 146819	687 bp upstream
Uqcc4	ubiquinol-cytochrome c reductase complex assembly factor 4	mRNA-UTR