rs13464510 SNP Detail

Summary

• ID
  rs13464510
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45159758 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                         TTCTGGGGG CGGGCTCTCT GCGGGTGGAA AAGTGGGCGT
  GACTTAGGAG AGAAATCGCC AGAAACCTGG CGGAGGTTGC TGGCCTTAAA AAACGCCCTC
  W
  GCACTGGAGA GGTGAGGGGG GTTCAGAAGC CGTGGGCAAG AGGGGCTGGA GCGCGTGATA
  CTTGTCCAGT GTCAGGCCTC GGCGGTCCCG GCAGAAGGGG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46154009	mCV22698117	ABI	CRAMUS_MOUSE	r	SNP	A	T	A	A
ss149136091	ENSMUSSNP6794996	ENSEMBL	ENSEMBL_Sanger	r	SNP		T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs13464510					SNP	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45159758 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi19064	CpG island 19064	within coordinates
Nucb1	nucleobindin 1	within coordinates
Rr400313	regulatory region 400313	within coordinates
Rr646472	regulatory region 646472	19 bp distal
Rr646473	regulatory region 646473	within coordinates
Rr646474	regulatory region 646474	705 bp proximal
Tssr72423	transcription start site region 72423	17 bp downstream
Tssr72424	transcription start site region 72424	32 bp downstream
Tssr72425	transcription start site region 72425	66 bp downstream
Tulp2	TUB like protein 2	within coordinates