rs13466907 SNP Detail

Summary

• ID
  rs13466907
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:107910374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTAACAT ACTGCTTTTT
  CTTCCTTCTT TTCCAGTTCC TGGGCGTATT GGTTTGTCCC CATCGTGGGC GCTATTCTTA
  TAGGTTTCTT GTATCGTCAC TTCTGGGCTG ACAGCAAATC CTCCTGAGGA GACCTCGTTG
  AAGTGCGGAG CACGTGCTCC TGCGATGAGA GGAGGAGACT TGTGTGGAGG CTGCAGGGTG
  Y
  TCCCTCCTTG GAACCTGCCA GTTGTTTTCT TTCCCCTTGG AGCCAAGATG GTTGACCAGA
  TATCTATCCT CCTTCAGTGT ACGACCAGAG TCTTTCATCC GCCAGAGCCT GACGCCCAAA
  GCACCTGCTC ACTCTGTGTC CTTGCCAGGG TTTCTCTCAT TGGTTCCCAC TCCTTCCTTT
  CATTTCAAAA GTTGATGCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47504551	NES11220192	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs13466907					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47504551	NES11220192	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:107910374 () rs orientation: forward

Symbol	Name	Function Class
Cyb5b	cytochrome b5 type B	within coordinates
Rr669364	regulatory region 669364	885 bp distal
Tssr79292	transcription start site region 79292	639 bp downstream