AGCCCAAGTA CCTTAATCAG GTTGTTGCAG AACCAGTAGA CGCCGCCCAT Y TGCAGCAGGG TGTCAAGGAT GTGGATGGAG CGGCTGTCCA CCCAGCCCTT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37289923 | NES08558166 | PERLEGEN | MM_PANEL2 | r | SNP | A | A | A | A | A | A | G | A | A | A | G | A | A | G | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
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rs13468108 | SNP | T | T | T | T | T | T | C | T | T | T | C | T | T | C | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37289923 | NES08558166 | PERLEGEN | MM_PANEL | r | SNP | A/G |
Location: Chr11:98598402 () rs orientation: reverse | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Med24 | mediator complex subunit 24 | Coding-Synonymous | ||||||
mRNA-UTR | ||||||||
Noncoding-Transcript-Variant | ||||||||
Tssr110580 | transcription start site region 110580 | 1006 bp upstream | ||||||
Tssr110581 | transcription start site region 110581 | within coordinates | ||||||
Tssr110582 | transcription start site region 110582 | 69 bp downstream | ||||||
Tssr110583 | transcription start site region 110583 | 160 bp downstream | ||||||
Tssr110584 | transcription start site region 110584 | 181 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 07/22/2025 MGI 6.24 |
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