rs13468826 SNP Detail

Summary

• ID
  rs13468826
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129472129 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GCTGA AATTCCAGGC AGTGGGAGAG
  R
  AGGGTGAGGA GGATGAGGAA GAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147442963	ENSMUSSNP4404513	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	C
ss321314005	CHEV_4_129255580	CHEVERUD	SCREENING_POP	r	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs13468826					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129472129 () rs orientation: reverse

Symbol	Name	Function Class
Fam167b	family with sequence similarity 167, member B	Coding-NonSynonymous
Rr600281	regulatory region 600281	1254 bp distal
Rr600282	regulatory region 600282	1017 bp distal
Rr600283	regulatory region 600283	203 bp proximal
Rr600284	regulatory region 600284	1508 bp proximal
Tssr43532	transcription start site region 43532	176 bp downstream
Tssr43533	transcription start site region 43533	185 bp downstream
Tssr43534	transcription start site region 43534	199 bp downstream