rs13470573 SNP Detail

Summary

• ID
  rs13470573
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:92132336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGTC ATTCAGAGTG AGTCCCCTCT
  K
  CGAGGGAAAG CCGGGCTACT GCAGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136805860	ENSMUSSNP4621936	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs13470573					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:92132336 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22145	CpG island 22145	within coordinates
Gm67683	predicted gene, 67683	within coordinates
Plscr1	phospholipid scramblase 1	within coordinates
Rr206878	regulatory region 206878	within coordinates
Rr383753	regulatory region 383753	within coordinates
Tssr86494	transcription start site region 86494	616 bp downstream
Tssr86495	transcription start site region 86495	594 bp downstream
Tssr86496	transcription start site region 86496	554 bp downstream
Tssr86497	transcription start site region 86497	530 bp downstream
Tssr86498	transcription start site region 86498	249 bp downstream
Tssr86499	transcription start site region 86499	223 bp downstream
Tssr86500	transcription start site region 86500	215 bp downstream
Tssr86501	transcription start site region 86501	185 bp downstream
Tssr86502	transcription start site region 86502	156 bp downstream
Tssr86503	transcription start site region 86503	96 bp downstream
Tssr86504	transcription start site region 86504	9 bp downstream
Tssr86505	transcription start site region 86505	13 bp upstream
Tssr90887	transcription start site region 90887	189 bp downstream
Tssr90888	transcription start site region 90888	227 bp downstream