rs13470684 SNP Detail

Summary

• ID
  rs13470684
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126922511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             AGTGTTGACA TCTAAAGCCA GCGTGAAAAC TGTATCCATA GAGAGTTCGC
  R
  CCCCAAGATC CCGAACCTCT CTCTCTCTTC ACGGACACTG ACTGAAGAGG           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45377993	mCV23164971	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss147518869	ENSMUSSNP4725718	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs13470684					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126922511 () rs orientation: forward

Symbol	Name	Function Class
Blvra	biliverdin reductase A	within coordinates
Rr38146	regulatory region 38146	1490 bp proximal
Rr55562	regulatory region 55562	within coordinates
Tssr19977	transcription start site region 19977	1666 bp downstream
Tssr19978	transcription start site region 19978	380 bp downstream
Tssr19979	transcription start site region 19979	343 bp downstream
Tssr19980	transcription start site region 19980	329 bp downstream
Tssr19981	transcription start site region 19981	94 bp downstream
Tssr19982	transcription start site region 19982	61 bp downstream
Tssr19983	transcription start site region 19983	11 bp downstream
Tssr19984	transcription start site region 19984	965 bp upstream