rs13475014 SNP Detail

Summary

• ID
  rs13475014
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35945757 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CAGTA TGTGAGGCCA GAAGTCAATG
  M
  TCAGCTTTCA GAGTTCTGCA TCGGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47440372	NES11516777	PERLEGEN	MM_PANEL2	r	SNP	G		G	G	G	T	G	G	G	G	G		T	G	G	G		G
ss149156666	ENSMUSSNP744522	ENSEMBL	ENSEMBL_Sanger	r	SNP		G	G						G
ss322587360	CHEV_8_36541657	CHEVERUD	SCREENING_POP	r	SNP												G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs13475014					SNP	C	C	C	C	C	A	C	C	C	C	C	C	A	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47440372	NES11516777	PERLEGEN	MM_PANEL	r	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35945757 () rs orientation: reverse

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	738 bp proximal
Rr662195	regulatory region 662195	815 bp proximal
Rr662196	regulatory region 662196	910 bp proximal
Rr662197	regulatory region 662197	1071 bp proximal
Tssr80937	transcription start site region 80937	1956 bp downstream