rs13482043 SNP Detail

Summary

• ID
  rs13482043
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14302987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCT CCTTCCACAG TCACGAGATG
  R
  TTTGTCTTCA TCACACTGGC TTCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/10J	C57BLKS/J	CAST/EiJ	CBA/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	JF1/Ms	KK/HlJ	LG/J	LP/J	MA/MyJ	MAI/Pas	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	RIIIS/J	SEG/Pas	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss16380812	14.003.454	TWGNF	TWGNF-Mouse-2	f	SNP	G	G					G		A	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G		G	G	G	G	G	G	A	A
ss39158070	mCV25199268	ABI	CRAMUS_MOUSE	f	SNP		G	A					A							G
ss62078297	NES17151160	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	G				G				G		G		G					G		G	A				G							A
ss138987151	ENSMUSSNP856848	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A												G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/10J	C57BLKS/J	CAST/EiJ	CBA/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	JF1/Ms	KK/HlJ	LG/J	LP/J	MA/MyJ	MAI/Pas	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	RIIIS/J	SEG/Pas	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs13482043					SNP	G	G	A	A	A	A	G	A	A	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	A	A	G	G	G	G	G	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62078297	NES17151160	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14302987 () rs orientation: forward

Symbol	Name	Function Class
Pdhb	pyruvate dehydrogenase (lipoamide) beta	within coordinates
Pxk	PX domain containing serine/threonine kinase	1669 bp downstream