rs13483927 SNP Detail

Summary

• ID
  rs13483927
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:105253153 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAT TTTAGGTGTA TGTAAAACTT
  M
  ATGCAATTGT ACAGACCTTG CATAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BLKS/J	C57L/J	C58/J	CBA/J	CE/J	DBA/2J	I/LnJ	JF1/Ms	KK/HlJ	LG/J	LP/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss16383485	X.091.222i	TWGNF	TWGNF-Mouse-2	f	SNP	C	C	C	A	C	C	A	A	C	A	A	C	C	C	C	C	C		C	C	C	A	C	C	C	C	C	C	A	C	C	C	C
ss46490948	mCV25149693	ABI	CRAMUS_MOUSE	f	SNP		C					A							C
ss134261523	ENSMUSSNP6078162	ENSEMBL	ENSEMBL_Sanger	f	SNP		C												C
ss325907991	CHEV_X_103404886	CHEVERUD	SCREENING_POP	f	SNP																		C											A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BLKS/J	C57L/J	C58/J	CBA/J	CE/J	DBA/2J	I/LnJ	JF1/Ms	KK/HlJ	LG/J	LP/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs13483927					SNP	C	C	C	A	C	C	A	A	C	A	A	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	A	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:105253153 () rs orientation: forward

Symbol	Name	Function Class
Taf9b	TATA-box binding protein associated factor 9B	within coordinates
Tssr164020	transcription start site region 164020	1438 bp upstream