rs13495115 SNP Detail

Summary

• ID
  rs13495115
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:149721762 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TACAG CCGGGAAGAG CTTCTGGACA
  R
  CATGTATAAC AATGAGCAGG GGCGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/LacJ	SM/J	SPRET/EiJ
ss20410562	PS02193784	PERLEGEN	MM_PANEL	f	SNP		A	A	A	A	G	A	A	A	G	G			A	G	G		G
ss45793744	mCV22688711	ABI	CRAMUS_MOUSE	r	SNP	T	T		T						C		C
ss144707128	ENSMUSSNP5281061	ENSEMBL	ENSEMBL_Sanger	r	SNP		T		T								C
ss321721675	CHEV_5_150600872	CHEVERUD	SCREENING_POP	r	SNP													T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/LacJ	SM/J	SPRET/EiJ
rs13495115					SNP	A	A	A	A	A	G	A	A	A	G	G	G	A	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:149721762 () rs orientation: reverse

Symbol	Name	Function Class
Gm71685	predicted gene, 71685	within coordinates