rs13497348 SNP Detail

Summary

• ID
  rs13497348
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135042902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT TGAGATAGGG CTTCTCTGTG
  M
  GACACCACTG CTTGACTCTA AAATG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	C3H/HeJ	CAST/EiJ	NZB/BlNJ	NZW/LacJ
ss20412833	PS02180520	PERLEGEN	MM_PANEL	f	SNP	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	A/HeJ	C3H/HeJ	CAST/EiJ	NZB/BlNJ	NZW/LacJ
rs13497348					SNP	A	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135042902 () rs orientation: forward

Symbol	Name	Function Class
Abhd11	abhydrolase domain containing 11	1873 bp downstream
Abhd11os	abhydrolase domain containing 11, opposite strand	1260 bp upstream
Gm73578	predicted gene, 73578	646 bp upstream
Rr110217	regulatory region 110217	1102 bp distal
Rr110218	regulatory region 110218	102 bp distal
Rr110219	regulatory region 110219	899 bp proximal
Rr124504	regulatory region 124504	701 bp distal
Tssr1662	transcription start site region 1662	1311 bp upstream
Tssr1663	transcription start site region 1663	878 bp upstream
Tssr1664	transcription start site region 1664	844 bp upstream
Tssr53717	transcription start site region 53717	1287 bp upstream
Tssr53718	transcription start site region 53718	1240 bp upstream
Tssr53719	transcription start site region 53719	1225 bp upstream
Tssr53720	transcription start site region 53720	1180 bp upstream
Tssr53721	transcription start site region 53721	923 bp upstream
Tssr53722	transcription start site region 53722	890 bp upstream