rs13498283 SNP Detail

Summary

• ID
  rs13498283
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135756927 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGCCTG TGCCTCTCAA
  GTGCCAGGAT TAAAGGTGTG CGCCACCACC GCAGGCGGCC GCCCACTTTT CCCCTGAGTT
  TGTCTTTGTG TCTGTGTGAG GGTGGCCGCT CATACTCATG CACATGATGT CCAGGTATGC
  AGAGGTCAGA AGTCACCTCA AGTGCTGGAA ACCTTACCAG ACTCTGTGTA TATATTCTGT
  R
  TAAGTATATG CAGCTGTGCG CACATACAGG CTAGAGGTAG CACAGGATGG CCAGCTTGTC
  GTGGTGTGGG ATGCAAACTC TCATCCTCAT GACTGGGGAT CAAGCCCTCT TCGTTGCTGG
  GCTATCTCTG CACATGCACA GCCCTCCCCC CCCCCCCATA CACCCCGGCC CACATCTCAC
  ACTCCTATCC CCTGAGCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	MSM/Ms	NZB/BlNJ	NZW/LacJ
ss20413782	PS02182921	PERLEGEN	MM_PANEL	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G		G	G
ss144510650	ENSMUSSNP6440110	ENSEMBL	ENSEMBL_Sanger	f	SNP											G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	MSM/Ms	NZB/BlNJ	NZW/LacJ
rs13498283					SNP	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135756927 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Rr124528	regulatory region 124528	526 bp distal
Tssr49178	transcription start site region 49178	583 bp upstream