rs13499943 SNP Detail

Summary

• ID
  rs13499943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192807078 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ACTAT TATAGCTAGA GCTCACAGGT
  R
  GTTGCTGGAA GTCTTCCCCT TAGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	NZB/BlNJ	SPRET/EiJ
ss20415472	PS02187224	PERLEGEN	MM_PANEL	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	NZB/BlNJ	SPRET/EiJ
rs13499943					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192807078 () rs orientation: reverse

Symbol	Name	Function Class
Rr15354	regulatory region 15354	1123 bp proximal
Rr367086	regulatory region 367086	1704 bp downstream
Utp25	UTP25 small subunit processome component	within coordinates